ImageSurfer:Free 3D Reconstruction Software for confocal microscopy

maximum intensity projection, direct volume rendering, and isosurface rendering

Link: ImageSurfer:Free 3D Reconstruction Software for confocal microscopy

X-ray Data Analysis Programs

Desktop Spectrum Analyzer is an X-ray data analysis program for the Macintosh platform. The NIST/NIH Desktop Spectrum Analyzer generates, interprets and analyzes x-ray spectra from specimens under electron bombardment.

Link: X-ray Data Analysis Programs

MTEX - A MATLAB Toolbox for Quantitative Texture Analysis

MTEX 2.0 software is for detecting grains and grain boundaries in EBSD data and computing manifold grains statics for them.

Link: MTEX - A MATLAB Toolbox for Quantitative Texture Analysis

Open Microscopy Environment

OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community.

Link: Open Microscopy Environment

SPIDER

System for Processing Image Data from Electron microscopy and Related fields.

Link: SPIDER

STERECON

A facility for making contour-based 3-D reconstructions from microscope images.

Link: STERECON

ImageSurfer:Free 3D Reconstruction Software for confocal microscopy

maximum intensity projection, direct volume rendering, and isosurface rendering

Link: ImageSurfer:Free 3D Reconstruction Software for confocal microscopy

NIH Image

Link: NIH Image